laue_dials package

Subpackages

• laue_dials.algorithms namespace
  • Submodules
  • laue_dials.algorithms.diffgeo module
    • align_hkls()
    • get_UB_matrices()
    • hkl2ray()
    • is_ray_equivalent()
    • mat_to_rot_xyz()
    • normalize()
    • orthogonalization()
    • rot_xyz_to_mat()
  • laue_dials.algorithms.integration module
    • Integrator
      • Integrator.assign_knn()
      • Integrator.estimate_background()
      • Integrator.estimate_profiles()
      • Integrator.integrate()
      • Integrator.pixel_weights
      • Integrator.score
      • Integrator.set_strong()
    • IntegratorBase
      • IntegratorBase.fg_to_image()
      • IntegratorBase.fit()
      • IntegratorBase.get_log_p_mdist()
      • IntegratorBase.log_profile_values
      • IntegratorBase.plot_image()
      • IntegratorBase.plot_image_with_profiles()
      • IntegratorBase.plot_profiles()
      • IntegratorBase.predict()
      • IntegratorBase.profile_dist
      • IntegratorBase.profile_values
      • IntegratorBase.single_profile_image()
      • IntegratorBase.windows
      • IntegratorBase.xy
    • cov()
    • detector_global_pixels()
    • estimate_integration_radius()
    • mvn_log_pdf()
    • panel_validity()
    • stack_panels()
    • unmasked_prediction_selection()
  • laue_dials.algorithms.laue module
    • LaueAssigner
      • LaueAssigner.H
      • LaueAssigner.assign()
      • LaueAssigner.harmonics
      • LaueAssigner.qobs
      • LaueAssigner.qpred
      • LaueAssigner.reject_outliers()
      • LaueAssigner.reset_inliers()
      • LaueAssigner.s1
      • LaueAssigner.set_H()
      • LaueAssigner.set_harmonics()
      • LaueAssigner.set_inliers()
      • LaueAssigner.set_qpred()
      • LaueAssigner.set_wav()
      • LaueAssigner.update_rotation()
      • LaueAssigner.wav
    • LaueBase
      • LaueBase.RB
    • LauePredictor
      • LauePredictor.predict_s1()
    • gen_beam_models()
    • remove_beam_models()
    • store_wavelengths()
  • laue_dials.algorithms.monochromatic module
    • find_spots()
    • initial_index()
    • scan_varying_refine()
  • laue_dials.algorithms.outliers module
    • gen_kde()
• laue_dials.command_line namespace
  • Submodules
  • laue_dials.command_line.compute_rmsds module
    • run()
  • laue_dials.command_line.find_spots module
    • run()
  • laue_dials.command_line.index module
    • run()
  • laue_dials.command_line.integrate module
    • get_refls_image()
    • integrate_image()
    • mtz_centroids()
    • panel_ids_for()
    • run()
    • shared_frame_centroids()
    • unmasked_selection_per_panel()
  • laue_dials.command_line.optimize_indexing module
    • index_image()
    • run()
  • laue_dials.command_line.plot_wavelengths module
    • run()
  • laue_dials.command_line.predict module
    • filter_masked_predictions()
    • predict_spots()
    • run()
  • laue_dials.command_line.refine module
    • correct_identifiers()
    • refine_image()
    • run()
  • laue_dials.command_line.sequence_to_stills module
    • run()
    • sequence_to_stills()
  • laue_dials.command_line.version module
    • run()
• laue_dials.utils namespace
  • Submodules
  • laue_dials.utils.matching module
    • laue_version()
    • split_stills_by_image()
  • laue_dials.utils.version module
    • laue_version()

Module contents